{"id":14,"date":"2026-05-06T08:59:08","date_gmt":"2026-05-06T08:59:08","guid":{"rendered":"https:\/\/denglab.org.cn\/?page_id=14"},"modified":"2026-05-06T15:25:20","modified_gmt":"2026-05-06T15:25:20","slug":"home","status":"publish","type":"page","link":"https:\/\/denglab.org.cn\/","title":{"rendered":""},"content":{"rendered":"\n
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\ud83d\udcd1 Latest Publication<\/em><\/strong><\/h1>\n\n\n\n

Microbial synthesis structures organic compound composition in anaerobic digestion<\/strong><\/h2>\n\n\n\n

Xingsheng Yang, Bo Zhao, Kai Feng, Jie Wang, Mingqian Liu, Xi Peng, Qing He, Yanjuan Lu, Hassan Waseem, Shang Wang, Mari-Karoliina H Winkler, Joana Falc\u00e3o Salles, Ye Deng*. The ISME Journal, 2026, wrag036<\/p>\n\n\n\n

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Read the Original Paper<\/a><\/div>\n<\/div>\n<\/div><\/div>\n<\/div><\/div>\n\n\n\n
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DMAP<\/strong><\/h2>\n\n\n\n

Metagenomic Analysis Pipeline<\/strong><\/p>\n\n\n\n

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For high-throughput sequencing data analysis, focusing on amplicon sequencing data (16S rRNA, ITS, 18S rRNA and functional genes).<\/p>\n\n\n\n

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\ud83d\udc49\ud83c\udffb Start Your Analysis<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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iNAP & iNAP2.0<\/strong><\/h2>\n\n\n\n

Integrated Network Analysis Pipeline<\/strong><\/p>\n\n\n\n

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Foe modeling, analyzing and managing the Molecular Ecological Networks <\/em>and Metabolic Interaction Networks<\/em> based on metabolic models.<\/p>\n\n\n\n

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\ud83d\udc49\ud83c\udffb Start Your Analysis<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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ARDEP<\/strong><\/h2>\n\n\n\n

A Rapid DEgenerate Primer design program<\/strong><\/p>\n\n\n\n

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For sequence database management and primer assessment.<\/p>\n\n\n\n

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\ud83d\udc49\ud83c\udffb Start Your Analysis<\/a><\/div>\n<\/div>\n<\/div>\n<\/div>\n\n\n\n
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ARGA<\/strong><\/h2>\n\n\n\n

Antibiotic Resistance Gene Analyzer<\/strong><\/p>\n\n\n\n

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For antibiotic resistance genes (ARGs) analysis based on the Sequence Database for ARGs (SDARG).<\/p>\n\n\n\n

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\ud83d\udc49\ud83c\udffb Start Your Analysis<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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NcycFunGen<\/strong><\/h2>\n\n\n\n

Nitrogen Cycling Functional Gene Analyzer<\/strong><\/p>\n\n\n\n

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For nitrogen functional gene analysis based on the Sequence Database for NcycFunGen.<\/p>\n\n\n\n

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\ud83d\udc49\ud83c\udffb Start Your Analysis<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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REMIRGE<\/strong><\/h2>\n\n\n\n

Reprogrammed Expectation Maximization Iterative Reconstruction of Genes from the Environment<\/strong><\/p>\n\n\n\n

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For reconstructing full-length functional(or ribosomal) genes from microbial community short read sequencing data.<\/p>\n\n\n\n

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\ud83d\udc49\ud83c\udffb Start Your Analysis<\/a><\/div>\n<\/div>\n<\/div>\n<\/div>\n\n\n\n
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News<\/p>\n<\/div>\n\n\n\n

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Follow our Wechat Public Account: @\u5fae\u751f\u6001\u7b14\u8bb0<\/p><\/blockquote><\/figure>\n<\/blockquote>\n<\/div>

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\ud83c\udfc6 2026-1-30<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201c2025 Highly Cited Chinese Researcher in Ecology\u201d by Elsevier.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2025-11-20<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201cHighly Cited Researcher 2025\u201d by Clarivate in the cross-field.
This was the 8th HCR award.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2025-6-9<\/strong><\/h2>\n\n\n\n

Dr. Deng was was ranked in the \u201cBest Ecology and Evolution Scientists\u201d by Research.com
as national 13th and global 634th.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2025-3-5<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201c2024 Highly Cited Chinese Researcher in Ecology\u201d by Elsevier.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2024-11-19<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201cHighly Cited Researcher 2024\u201d by Clarivate in the cross-field.
This was the 7th HCR award.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2024-9-9<\/strong><\/h2>\n\n\n\n

Dr. Deng was was ranked in the \u201cBest Ecology and Evolution Scientists\u201d by Research.com
as national 16th and global 949th.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2024-3-27<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201c2023 <\/strong>Highly Cited Chinese Researcher in Ecology\u201d by Elsevier.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2023-11-16<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201cHighly Cited Researcher 2023\u201d by Clarivate.
This was the 6th HCR award.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2023-5-5<\/strong><\/h2>\n\n\n\n

Dr. Deng was ranked in the \u201cBest Ecology and Evolution Scientists<\/strong>\u201d by Research.com
as national 17th and global 1029th.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2022-11-16<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201cHighly Cited Researcher 2022<\/strong>\u201d by Clarivate.
This was the 5th HCR award.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2021-11-15<\/strong><\/h2>\n\n\n\n

Dr. Deng was honored as a \u201cHighly Cited Researcher 2021<\/strong>\u201d by Clarivate.
This was the 4th HCR award in the field of Cross-Field for Dr. Deng since 2018.
According to the Web of Sciences, the major fields of Dr. Deng were classified
into Microbiology and Environmental Science.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2021-9-1<\/strong><\/h2>\n\n\n\n

Dr. Deng started to serve as a senior editor<\/strong> for the ISME Journal<\/strong><\/em>,
which is the flagship journal of the International Scociety of Microbial ecology.<\/p>\n<\/div><\/div>\n\n\n\n

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\ud83c\udfc6 2021-6-1<\/strong><\/h2>\n\n\n\n

Dr. Deng started to serve as an associate editor<\/strong> for both Microbiome<\/em><\/strong> and
Environmental Microbiome<\/em><\/strong> journals. Besides, Dr. Deng is an editorial board
member of BMC Microbiology<\/em><\/strong>. All these three journals are BMC series journals.<\/p>\n<\/div><\/div>\n<\/div><\/div>\n\n\n\n

<\/p>\n","protected":false},"excerpt":{"rendered":"

DMAP Metagenomic Analysis Pipeline For high-throughput sequencing data analysis, focusing on amplicon sequencing data (16S rRNA, ITS, 18S rRNA and functional genes). iNAP & iNAP2.0 Integrated Network Analysis Pipeline Foe modeling, analyzing and managing the Molecular Ecological Networks and Metabolic Interaction Networks based on metabolic models. ARDEP A Rapid DEgenerate Primer design program For sequence […]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-14","page","type-page","status-publish","hentry"],"blocksy_meta":[],"_links":{"self":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages\/14","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/comments?post=14"}],"version-history":[{"count":20,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages\/14\/revisions"}],"predecessor-version":[{"id":176,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages\/14\/revisions\/176"}],"wp:attachment":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/media?parent=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}