{"id":75,"date":"2026-05-06T12:31:18","date_gmt":"2026-05-06T12:31:18","guid":{"rendered":"https:\/\/denglab.org.cn\/?page_id=75"},"modified":"2026-05-06T12:31:18","modified_gmt":"2026-05-06T12:31:18","slug":"publications-in-2022","status":"publish","type":"page","link":"https:\/\/denglab.org.cn\/index.php\/publications-in-2022\/","title":{"rendered":"Publications in 2022"},"content":{"rendered":"\n
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  1. Zheng Zhang, Hongjun Li, Wenli Shen, Kai Feng, Shuzhen Li, Songsong Gu, Yuqi Zhou, Xi Peng, Xiongfeng Du, Qing He, Linlin Wang, Zhaojing Zhang, Danrui Wang, Zhujun Wang, Ye Deng*. The stability of phyto-zooplanktonic networks varied with zooplanktonic sizes in Chinese coastal ecosystem. mSystems, 2022, doi.org\/10.1128\/msystems.00821-22\u00a0<\/strong>Read More<\/a><\/li>\n\n\n\n
  2. Zhujun Wang, Kai Feng, Ziyan Wei, Yueni Wu, Kazuo Isobe, Keishi Senoo, Xi Peng, Danrui Wang, Qing He, Xiongfeng Du, Shuzhen Li, Yan Li, Ye Deng*. Evaluation and redesign of the primers for detecting nitrogen cycling genes in environments. Methods in Ecology and Evolution, 2022, doi.org\/10.1111\/2041-210X.13946<\/strong>\u00a0Read More<\/a>\u00a0<\/strong><\/li>\n\n\n\n
  3. Huilin Yan, Songsong Gu, Shuzhen Li, Wenli Shen, Xueli Zhou, Hao Yu, Kun Ma, Yangan Zhao, Yingcheng Wang, Hua Zheng, Ye Deng*, Guangxin Lu*. Grass-legume mixtures enhance forage production via the bacterial community. Agriculture Ecosystems & Environment, 2022, doi.org\/10.1016\/j.agee.2022.108087\u00a0<\/strong>Read More<\/strong><\/a><\/li>\n\n\n\n
  4. Lin Tan, Yansong Xiao, Wei-ai Zeng, Songsong Gu, Zhengguang Zhai, Shaolong Wu, Pengfei Li, Kai Feng, Ye Deng*, Qiulong Hu*, Network analysis reveals the root endophytic fungi associated with Fusarium root rot invasion. Applied Soil Ecology, 2022, doi.org\/10.1016\/j.apsoil.2022.104567\u00a0<\/strong>Read More<\/strong><\/a><\/li>\n\n\n\n
  5. Danrui Wang, Shang Wang, Xiongfeng Du, Qing He, Yue Liu, Zhujun Wang, Kai Feng, Yan Li, Ye Deng*. ddPCR surpasses classical qPCR technology in quantitating bacteria and fungi in the environment. Molecular Ecology Resources, 2022, doi.org\/10.1111\/1755-0998.13644\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  6. Shuzhen Li, Wenli Shen, Shenyang Lian, Yueni Wu, Yuanyuan Qu, Ye Deng*. DARHD: a sequence database for aromatic ring-hydroxylating dioxygenase analysis and primer evaluation. Journal of Hazardous Materials, 2022, doi.org\/10.1016\/j.jhazmat.2022.129230\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  7. Kun Ma, Yingcheng Wang, Xin Jin, Yangan Zhao, Huilin Yan, Haijuan Zhang, Xueli Zhou, Guangxin Lu*, Ye Deng*, Application of Organic Fertilizer Changes the Rhizosphere Microbial Communities of a Gramineous Grass on Qinghai-Tibet Plateau. Microorganisms, 2022, doi.org\/10.3390\/microorganisms10061148\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  8. Xingsheng Yang, Zhaojing Zhang, Shuzhen Li, Qing He, Xi Peng, Xiongfeng Du, Kai Feng, Shang Wang*, Ye Deng*. Fungal dynamics and potential functions during anaerobic digestion of food waste. Environmental Research, 2022, doi.org\/10.1016\/j.envres.2022.113298\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  9. Ziyan Wei, Wenli Shen, Kai Feng, Youzhi Feng, Zhili He, Yan Li, Chengying Jiang, Shuangjiang Liu, Yong-Guan Zhu, Ye Deng*. Organic fertilizer potentiates the transfer of typical antibiotic resistance gene among special bacterial species. Journal of Hazardous Materials, 2022, doi.org\/10.1016\/j.jhazmat.2022.128985\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  10. \ud83c\udfc6Kai Feng, Xi Peng, Zheng Zhang, Songsong Gu, Qing He, Wenli Shen, Zhujun Wang, Danrui Wang, Qiulong Hu, Yan Li, Shang Wang, Ye Deng*. iNAP: An integrated network analysis pipeline for microbiome studies. iMeta, 2022, doi.org\/10.1002\/imt2.13\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  11. Zheng Zhang, Hongjun Li, Wenli Shen, Xiongfeng Du, Shuzhen Li, Ziyan Wei, Zhaojing Zhang, Kai Feng, Ye Deng*. The large-scale spatial patterns of ecological networks between phytoplankton and zooplankton in coastal marine ecosystems. Science of The Total Environment, 2022, doi.org\/10.1016\/j.scitotenv.2022.154285\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  12. Zhujun Wang, Kai Feng, Guangxin Lu, Hao Yu, Shang Wang, Ziyan Wei, Ning Dang, Yingcheng Wang, Ye Deng*. Homogeneous selection and dispersal limitation dominate the effect of soil strata under warming condition. Frontiers in Microbiology, 2022, doi.org\/10.3389\/fmicb.2022.801083\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  13. Shuzhen Li, Ye Deng*, Shengyang Lian, Chunxiao Dai, Qiao Ma, Yuanyuan Qu*. Succession of diversity, functions, and interactions of the fungal community in activated sludge under aromatic hydrocarbon stress. Environmental Research, 2022, doi.org\/10.1016\/j.envres.2021.112143\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  14. Chao Wang, Xinan Li, Decai Jin*, Peipan Gong, Qiuchi Li, Yunhui Zhang, Xiangrui Li, Ye Deng, Tomislav Cernava, Xun Zhu*.\u00a0Implications of environmentally shaped microbial communities for insecticide resistance in Sitobion miscanthi.\u00a0Environmental Research, 2022,\u00a0215: 114409\u00a0<\/strong>Read More<\/a><\/li>\n\n\n\n
  15. Wei Wei, Jia Li, Fan Liu, Miaomiao Wu, Kaixin Xiong, Qing He, Bo Zhang, Ye Deng, Yan Li*.\u00a0Alteration of intestinal microecology by oral antibiotics promotes oral squamous cell carcinoma development.\u00a0Molecular Immunology, 2022, 149: 94-106\u00a0Read More<\/a><\/li>\n\n\n\n
  16. Jinshan Lian, Huiying Wang, Ye Deng, Minggang Xu, Shutang Liu, Baoku Zhou, Kamlesh Jangid, Yinghua Duan*. Impact of long-term application of manure and inorganic fertilizers on common soil bacteria in different soil types. Agriculture, Ecosystems and Environment, 2022, doi.org\/10.1016\/j.agee.2022.108044Read More<\/a><\/li>\n\n\n\n
  17. Nana Liu, Huifeng Hu, Wenhong Ma, Ye Deng, Dimitar Dimitrov, Qinggang Wang, Nawal Shrestha, Xiangyan Su, Kai Feng, Yuqing Liu, Baihui Hao, Xinying Zhang, Xiaojuan Feng*, Zhiheng Wang*. Relationships Between Soil Microbial Diversities Across an Aridity Gradient in Temperate Grasslands. Microbial Ecology, 2022, doi.org\/10.1007\/s00248-022-01997-8\u00a0Read More<\/a><\/li>\n\n\n\n
  18. Dashuan Tian, Yangzhou Xiang, Eric Seabloom, Han Y. H. Chen, Jinsong Wang, Guirui Yu, Ye Deng, Zhaolei Li, Shuli Niu*. Ecosystem restoration and belowground multifunctionality: A network view. Ecological Applications, 2022, doi.org\/10.1002\/eap.2575\u00a0Read More<\/a><\/li>\n\n\n\n
  19. Shanghua Wu, Yuzhu Dong, Ye Deng, Lijuan Cui, Xuliang Zhuang*. Protistan consumers and phototrophs are more sensitive than bacteria and fungi to pyrene exposure in soil. Science of The Total Environment, 2022, doi.org\/10.1016\/j.scitotenv.2022.153539Read More<\/a><\/li>\n\n\n\n
  20. Luyao Kang, Leiyi Chen, Dianye Zhang, Yunfeng Peng, Yutong Song, Dan Kou, Ye Deng, Yuanhe Yang*. Stochastic processes dominate belowground community assembly in alpine grasslands on the Tibetan Plateau. Environmental Microbiology, 2022, doi.org\/10.1111\/1462-2920.15827Read More<\/a><\/li>\n\n\n\n
  21. Xianzhe Gong, Zhiyi Chen, Ye Deng, Duo Zhao, Ping Gao, Liang Zhang, Qichao Tu, Lingyun Qu, Liwen Zheng, Yong Zhang, Chao Song, Jihua Liu*.\u00a0Contrasting archaeal and bacterial community assembly processes and the importance of rare taxa along a depth gradient in shallow coastal sediments. 2022,\u00a0852: 158411\u00a0Read More<\/a><\/li>\n\n\n\n
  22. Jinshan Lian,\u00a0 Huiying Wang,\u00a0 Ye Deng,\u00a0 Minggang Xu,\u00a0 Shutang Liu,\u00a0 Baoku Zhou,\u00a0 Kamlesh Jangid,\u00a0 Yinghua Duan*. Impact of long-term application of manure and inorganic fertilizers on common soil bacteria in different soil types.\u00a0Agriculture Ecosystems & Environment.\u00a02022, 337: 108044\u00a0Read More<\/a><\/li>\n\n\n\n
  23. Wei Wei, Jia Li, Xin Shen, Jinglu Lyu, Caixia Yan, Boyu Tang, Wenjuan Ma, Huixu Xie, Lei Zhao, Lei Cheng, Ye Deng, Yan Li*.\u00a0Oral Microbiota from Periodontitis Promote Oral Squamous Cell Carcinoma Development via \u03b3\u03b4 T Cell Activation. mBio.\u00a02022, doi.org\/10.1128\/msystems.00469-22\u00a0Read More<\/a><\/li>\n\n\n\n
  24. Kenneth Dumack*, Kai Feng, Sebastian Flues, Melanie Sapp, Susanne Schreiter, Rita Grosch, Laura E. Rose, Ye Deng, Kornelia Smalla, Michael Bonkowski.\u00a0What Drives the Assembly of Plant-associated Protist Microbiomes? Investigating the Effects of Crop Species, Soil Type and Bacterial Microbiomes.\u00a0Protist.\u00a02022, doi.org\/10.1016\/j.protis.2022.125913\u00a0Read More<\/a><\/li>\n\n\n\n
  25. Songsong Gu, Xingyao Xiong, Lin Tan, Ye Deng, Xiongfeng Du, Xingxing Yang, Qiulong Hu*.\u00a0Soil microbial community assembly and stability are associated with potato (Solanum tuberosum L.) fitness under continuous cropping regime.\u00a0Frontiers in Plant Science. 2022,\u00a0 doi.org\/10.3389\/fpls.2022.1000045\u00a0Read More<\/a><\/li>\n\n\n\n
  26. Shiqing Nie, Jichen Wang, Ye Deng, Zheng Ye, Yuan Ge*. Inflammatory microbes and genes as potential biomarkers of Parkinson\u2019s disease. NPJ Biofilms and Microbiomes, 2022, 8: 101\u00a0Read More<\/a><\/li>\n\n\n\n
  27. \u5f6d\u73ba, \u51af\u51ef, \u5389\u8212\u796f, \u9093\u6654*, \u5b8f\u57fa\u56e0\u7ec4\u5b66\u6280\u672f\u4e0e\u5fae\u751f\u7269\u7fa4\u843d\u591a\u6837\u6027\u5206\u6790\u65b9\u6cd5, \u79d1\u6280\u5bfc\u62a5, 2022\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  28. \u8d75\u9633\u5b89, \u82a6\u5149\u65b0*, \u9093\u6654*, \u738b\u82f1\u6210, \u9a6c\u5764, \u989c\u73f2\u7498, \u5f20\u6d77\u5a1f, \u5468\u5b66\u4e3d, \u7aa6\u58f0\u4e91, \u6839\u7624\u83cc\u62cc\u79cd\u5bf9\u4e24\u79cd\u82dc\u84ff\u751f\u957f\u53ca\u6839\u9645\u5fae\u751f\u7269\u591a\u6837\u6027\u7684\u5f71\u54cd, \u8349\u5730\u5b66\u62a5, 2022\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  29. \u9a6c\u5764, \u82a6\u5149\u65b0*, \u9093\u6654*, \u989c\u73f2\u7498, \u738b\u82f1\u6210, \u8d75\u9633\u5b89, \u5f20\u6d77\u5a1f, \u5468\u5b66\u4e3d, \u7aa6\u58f0\u4e91, \u6709\u673a\u80a5\u5bf9\u5782\u7a57\u62ab\u78b1\u8349\u6839\u9645\u5fae\u751f\u7269\u53ca\u571f\u58e4\u7406\u5316\u6027\u8d28\u7684\u5f71\u54cd, \u8349\u5730\u5b66\u62a5, 2022\u00a0Read More<\/a><\/strong><\/li>\n\n\n\n
  30. \u5f20\u742a\uff0c\u9093\u6654\uff0c\u90b5\u5b97\u6cfd\uff0c\u738b\u4e07\u9e4f*\uff0c\u6f6e\u95f4\u5e26\u6c89\u79ef\u7269\u538c\u6c27\u70c3\u964d\u89e3\u7ec6\u83cc\u7684\u591a\u6837\u6027\u53caDesulfovibrio subterraneus<\/em>\u00a0ND17\u7684\u5206\u79bb\u9274\u5b9a\uff0c\u6d77\u6d0b\u5b66\u62a5\uff0c2022\u00a0Read More<\/a><\/li>\n<\/ol>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-75","page","type-page","status-publish","hentry"],"blocksy_meta":[],"_links":{"self":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages\/75","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/comments?post=75"}],"version-history":[{"count":1,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages\/75\/revisions"}],"predecessor-version":[{"id":76,"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/pages\/75\/revisions\/76"}],"wp:attachment":[{"href":"https:\/\/denglab.org.cn\/index.php\/wp-json\/wp\/v2\/media?parent=75"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}