Publications in 2022

  1. Zheng Zhang, Hongjun Li, Wenli Shen, Kai Feng, Shuzhen Li, Songsong Gu, Yuqi Zhou, Xi Peng, Xiongfeng Du, Qing He, Linlin Wang, Zhaojing Zhang, Danrui Wang, Zhujun Wang, Ye Deng*. The stability of phyto-zooplanktonic networks varied with zooplanktonic sizes in Chinese coastal ecosystem. mSystems, 2022, doi.org/10.1128/msystems.00821-22 Read More
  2. Zhujun Wang, Kai Feng, Ziyan Wei, Yueni Wu, Kazuo Isobe, Keishi Senoo, Xi Peng, Danrui Wang, Qing He, Xiongfeng Du, Shuzhen Li, Yan Li, Ye Deng*. Evaluation and redesign of the primers for detecting nitrogen cycling genes in environments. Methods in Ecology and Evolution, 2022, doi.org/10.1111/2041-210X.13946 Read More 
  3. Huilin Yan, Songsong Gu, Shuzhen Li, Wenli Shen, Xueli Zhou, Hao Yu, Kun Ma, Yangan Zhao, Yingcheng Wang, Hua Zheng, Ye Deng*, Guangxin Lu*. Grass-legume mixtures enhance forage production via the bacterial community. Agriculture Ecosystems & Environment, 2022, doi.org/10.1016/j.agee.2022.108087 Read More
  4. Lin Tan, Yansong Xiao, Wei-ai Zeng, Songsong Gu, Zhengguang Zhai, Shaolong Wu, Pengfei Li, Kai Feng, Ye Deng*, Qiulong Hu*, Network analysis reveals the root endophytic fungi associated with Fusarium root rot invasion. Applied Soil Ecology, 2022, doi.org/10.1016/j.apsoil.2022.104567 Read More
  5. Danrui Wang, Shang Wang, Xiongfeng Du, Qing He, Yue Liu, Zhujun Wang, Kai Feng, Yan Li, Ye Deng*. ddPCR surpasses classical qPCR technology in quantitating bacteria and fungi in the environment. Molecular Ecology Resources, 2022, doi.org/10.1111/1755-0998.13644 Read More
  6. Shuzhen Li, Wenli Shen, Shenyang Lian, Yueni Wu, Yuanyuan Qu, Ye Deng*. DARHD: a sequence database for aromatic ring-hydroxylating dioxygenase analysis and primer evaluation. Journal of Hazardous Materials, 2022, doi.org/10.1016/j.jhazmat.2022.129230 Read More
  7. Kun Ma, Yingcheng Wang, Xin Jin, Yangan Zhao, Huilin Yan, Haijuan Zhang, Xueli Zhou, Guangxin Lu*, Ye Deng*, Application of Organic Fertilizer Changes the Rhizosphere Microbial Communities of a Gramineous Grass on Qinghai-Tibet Plateau. Microorganisms, 2022, doi.org/10.3390/microorganisms10061148 Read More
  8. Xingsheng Yang, Zhaojing Zhang, Shuzhen Li, Qing He, Xi Peng, Xiongfeng Du, Kai Feng, Shang Wang*, Ye Deng*. Fungal dynamics and potential functions during anaerobic digestion of food waste. Environmental Research, 2022, doi.org/10.1016/j.envres.2022.113298 Read More
  9. Ziyan Wei, Wenli Shen, Kai Feng, Youzhi Feng, Zhili He, Yan Li, Chengying Jiang, Shuangjiang Liu, Yong-Guan Zhu, Ye Deng*. Organic fertilizer potentiates the transfer of typical antibiotic resistance gene among special bacterial species. Journal of Hazardous Materials, 2022, doi.org/10.1016/j.jhazmat.2022.128985 Read More
  10. 🏆Kai Feng, Xi Peng, Zheng Zhang, Songsong Gu, Qing He, Wenli Shen, Zhujun Wang, Danrui Wang, Qiulong Hu, Yan Li, Shang Wang, Ye Deng*. iNAP: An integrated network analysis pipeline for microbiome studies. iMeta, 2022, doi.org/10.1002/imt2.13 Read More
  11. Zheng Zhang, Hongjun Li, Wenli Shen, Xiongfeng Du, Shuzhen Li, Ziyan Wei, Zhaojing Zhang, Kai Feng, Ye Deng*. The large-scale spatial patterns of ecological networks between phytoplankton and zooplankton in coastal marine ecosystems. Science of The Total Environment, 2022, doi.org/10.1016/j.scitotenv.2022.154285 Read More
  12. Zhujun Wang, Kai Feng, Guangxin Lu, Hao Yu, Shang Wang, Ziyan Wei, Ning Dang, Yingcheng Wang, Ye Deng*. Homogeneous selection and dispersal limitation dominate the effect of soil strata under warming condition. Frontiers in Microbiology, 2022, doi.org/10.3389/fmicb.2022.801083 Read More
  13. Shuzhen Li, Ye Deng*, Shengyang Lian, Chunxiao Dai, Qiao Ma, Yuanyuan Qu*. Succession of diversity, functions, and interactions of the fungal community in activated sludge under aromatic hydrocarbon stress. Environmental Research, 2022, doi.org/10.1016/j.envres.2021.112143 Read More
  14. Chao Wang, Xinan Li, Decai Jin*, Peipan Gong, Qiuchi Li, Yunhui Zhang, Xiangrui Li, Ye Deng, Tomislav Cernava, Xun Zhu*. Implications of environmentally shaped microbial communities for insecticide resistance in Sitobion miscanthi. Environmental Research, 2022, 215: 114409 Read More
  15. Wei Wei, Jia Li, Fan Liu, Miaomiao Wu, Kaixin Xiong, Qing He, Bo Zhang, Ye Deng, Yan Li*. Alteration of intestinal microecology by oral antibiotics promotes oral squamous cell carcinoma development. Molecular Immunology, 2022, 149: 94-106 Read More
  16. Jinshan Lian, Huiying Wang, Ye Deng, Minggang Xu, Shutang Liu, Baoku Zhou, Kamlesh Jangid, Yinghua Duan*. Impact of long-term application of manure and inorganic fertilizers on common soil bacteria in different soil types. Agriculture, Ecosystems and Environment, 2022, doi.org/10.1016/j.agee.2022.108044Read More
  17. Nana Liu, Huifeng Hu, Wenhong Ma, Ye Deng, Dimitar Dimitrov, Qinggang Wang, Nawal Shrestha, Xiangyan Su, Kai Feng, Yuqing Liu, Baihui Hao, Xinying Zhang, Xiaojuan Feng*, Zhiheng Wang*. Relationships Between Soil Microbial Diversities Across an Aridity Gradient in Temperate Grasslands. Microbial Ecology, 2022, doi.org/10.1007/s00248-022-01997-8 Read More
  18. Dashuan Tian, Yangzhou Xiang, Eric Seabloom, Han Y. H. Chen, Jinsong Wang, Guirui Yu, Ye Deng, Zhaolei Li, Shuli Niu*. Ecosystem restoration and belowground multifunctionality: A network view. Ecological Applications, 2022, doi.org/10.1002/eap.2575 Read More
  19. Shanghua Wu, Yuzhu Dong, Ye Deng, Lijuan Cui, Xuliang Zhuang*. Protistan consumers and phototrophs are more sensitive than bacteria and fungi to pyrene exposure in soil. Science of The Total Environment, 2022, doi.org/10.1016/j.scitotenv.2022.153539Read More
  20. Luyao Kang, Leiyi Chen, Dianye Zhang, Yunfeng Peng, Yutong Song, Dan Kou, Ye Deng, Yuanhe Yang*. Stochastic processes dominate belowground community assembly in alpine grasslands on the Tibetan Plateau. Environmental Microbiology, 2022, doi.org/10.1111/1462-2920.15827Read More
  21. Xianzhe Gong, Zhiyi Chen, Ye Deng, Duo Zhao, Ping Gao, Liang Zhang, Qichao Tu, Lingyun Qu, Liwen Zheng, Yong Zhang, Chao Song, Jihua Liu*. Contrasting archaeal and bacterial community assembly processes and the importance of rare taxa along a depth gradient in shallow coastal sediments. 2022, 852: 158411 Read More
  22. Jinshan Lian,  Huiying Wang,  Ye Deng,  Minggang Xu,  Shutang Liu,  Baoku Zhou,  Kamlesh Jangid,  Yinghua Duan*. Impact of long-term application of manure and inorganic fertilizers on common soil bacteria in different soil types. Agriculture Ecosystems & Environment. 2022, 337: 108044 Read More
  23. Wei Wei, Jia Li, Xin Shen, Jinglu Lyu, Caixia Yan, Boyu Tang, Wenjuan Ma, Huixu Xie, Lei Zhao, Lei Cheng, Ye Deng, Yan Li*. Oral Microbiota from Periodontitis Promote Oral Squamous Cell Carcinoma Development via γδ T Cell Activation. mBio. 2022, doi.org/10.1128/msystems.00469-22 Read More
  24. Kenneth Dumack*, Kai Feng, Sebastian Flues, Melanie Sapp, Susanne Schreiter, Rita Grosch, Laura E. Rose, Ye Deng, Kornelia Smalla, Michael Bonkowski. What Drives the Assembly of Plant-associated Protist Microbiomes? Investigating the Effects of Crop Species, Soil Type and Bacterial Microbiomes. Protist. 2022, doi.org/10.1016/j.protis.2022.125913 Read More
  25. Songsong Gu, Xingyao Xiong, Lin Tan, Ye Deng, Xiongfeng Du, Xingxing Yang, Qiulong Hu*. Soil microbial community assembly and stability are associated with potato (Solanum tuberosum L.) fitness under continuous cropping regime. Frontiers in Plant Science. 2022,  doi.org/10.3389/fpls.2022.1000045 Read More
  26. Shiqing Nie, Jichen Wang, Ye Deng, Zheng Ye, Yuan Ge*. Inflammatory microbes and genes as potential biomarkers of Parkinson’s disease. NPJ Biofilms and Microbiomes, 2022, 8: 101 Read More
  27. 彭玺, 冯凯, 厉舒祯, 邓晔*, 宏基因组学技术与微生物群落多样性分析方法, 科技导报, 2022 Read More
  28. 赵阳安, 芦光新*, 邓晔*, 王英成, 马坤, 颜珲璘, 张海娟, 周学丽, 窦声云, 根瘤菌拌种对两种苜蓿生长及根际微生物多样性的影响, 草地学报, 2022 Read More
  29. 马坤, 芦光新*, 邓晔*, 颜珲璘, 王英成, 赵阳安, 张海娟, 周学丽, 窦声云, 有机肥对垂穗披碱草根际微生物及土壤理化性质的影响, 草地学报, 2022 Read More
  30. 张琪，邓晔，邵宗泽，王万鹏*，潮间带沉积物厌氧烃降解细菌的多样性及Desulfovibrio subterraneus ND17的分离鉴定，海洋学报，2022 Read More