Publications in 2023

  1. Danrui Wang, Jiangtao Li, Lei Su, Wenli Shen, Kai Feng, Xi Peng, Zhujun Wang, Bo Zhao, Zheng Zhang, Zhaojing Zhang, Étienne Yergeau, Ye Deng. Phylogenetic diversity of functional genes in deep-sea cold seeps: a novel perspective on metagenomics. Microbiome, 2023, 11: 276Read More
  2. Songsong Gu, Xueli Zhou, Hao Yu*, Huilin Yan, Yingcheng Wang, Yue Liu, Zhihui Wang, Kai Feng, Xiongfeng Du, Guangxin Lu, Ye Deng*. Microbial and chemical fertilizers for restoring degraded alpine grassland. Biology and Fertility of Soils, 2023, 10.1007/s00374-023-01759-9Read More
  3. Qing He, Shang Wang*, Kai Feng, Sean T Michaletz, Weiguo Hou, Wenhui Zhang, Fangru Li, Yidi Zhang, Danrui Wang, Xi Peng, Xingsheng Yang, Ye Deng*. High speciation rate of niche specialists in hot springs. The ISME Journal, 2023, doi.org/10.1038/s41396-023-01447-4 Read More
  4. Haijuan Zhang†, Kaifu Zheng†, Songsong Gu, Yingcheng Wang, Xueli Zhou, Huilin Yan, Kun Ma, Yangan Zhao, Xin Jin, Guangxin Lu*,  Ye Deng*. Grass–Legume Mixture with Rhizobium Inoculation Enhanced the Restoration Effects of Organic Fertilizer. Microorganisms, 2023, 11(5), 1114 Read More
  5. Zheng Zhang, Jiang Li*, Hongjun Li, Linlin Wang, Yuqi Zhou, Shuzhen Li, Zhaojing Zhang, Kai Feng, Ye Deng*. Environmental DNA metabarcoding reveals the influence of human activities on microeukaryotic plankton along the Chinese coastline. Water Research, 2023, 233: 119730 Read More
  6. Xiongfeng Du, SongSong Gu, Zheng Zhang, Shuzhen Li, Yuqi Zhou, Zhaojing Zhang, Qi Zhang, Linlin Wang, Zhicheng Ju, Chengliang Yan, Tong Li, Danrui Wang, Xingsheng Yang, Xi Peng, Ye Deng*. Spatial distribution patterns across multiple microbial taxonomic groups. Environmental Research, 2023, 223: 115470  Read More
  7. Huilin Yan†, Xueli Zhou†, Kaifu Zheng, Songsong Gu, Hao Yu, Kun Ma, Yangan Zhao, Yingcheng Wang,Hua Zheng, Hanjiang Liu, Dejun Shi, Guangxin Lu*, Ye Deng*. Response of Organic Fertilizer Application to Soil Microorganisms and Forage Biomass in Grass–Legume Mixtures. Agronomy, 2023, 13(2): 481 Read More
  8. Yingcheng Wang†, Ning Dang†, Kai Feng, Junbang Wang, Xin Jin, Shiting Yao, Linlin Wang, Songsong Gu, Hua Zheng, Guangxin Lu*, Ye Deng*. Grass-microbial inter-domain ecological networks associated with alpine grassland productivity. Frontiers in Microbiology, 2023, 14:1109128 Read More
  9. Linlin Wang, Mingliang Zhao, Xiongfeng Du, Kai Feng, Songsong Gu, Yuqi Zhou, Xingsheng Yang, Zhaojing Zhang, Yingcheng Wang, Zheng Zhang, Qi Zhang, Baohua Xie, Guangxuan Han, Ye Deng*. Fungi and cercozoa regulate methane-associated prokaryotes in wetland methane emissions. Frontiers in Microbiology, 2023, 13: 1076610, doi: 10.3389/fmicb.2022.1076610 Read More
  10. Lingzhan Miao, Wanyi Li, Tanveer M. Adyel, Yu Yao, Ye Deng*, Jun Wu, Yongqiang Zhou, Yue Yu, Jun Hou*. Spatio-temporal succession of microbial communities in plastisphere and their potentials for plastic degradation in freshwater ecosystems. Water Research, 2023, doi.org/10.1016/j.watres.2022.119406 Read More
  11. Mengyue Sun, Mingcong Li, Yuqi Zhou, Jiai Liu, Wenchong Shi, Xiaoliang Wu, Baohua Xie*, Ye Deng*, Zheng Gao*. Nitrogen deposition enhances the deterministic process of the prokaryotic community and increases the complexity of the microbial co-network in coastal wetlands. Science of the Total Environment, 2023, doi.org/10.1016/j.scitotenv.2022.158939 Read More
  12. Ke Shi, Bin Liang*, Kai Feng, Daliang Ning, Carolyn R. Cornell, Yanqing Zhang, Wenbin Xu, Min Zhou, Ye Deng, Jiandong Jiang, Tiejun Liu, Aijie Wang, Jizhong Zhou. Electrostimulation triggers an increase in cross-niche microbial associations toward enhancing organic nitrogen wastewater treatment. Journal of Environmental Management, 2023, 331: 117301 Read More
  13. Xiu-Tong Li, Zhong-Sheng Huang, Ye Huang, Zhen Jiang, Zong-Lin Liang, Hua-Qun Yin, Guang-Ji Zhang, Yan Jia, Ye Deng, Shuang-Jiang Liu*, Cheng-Ying Jiang*. Responses of microbial community to geochemical parameters on vertical depth in bioheap system of low-grade copper sulfide. Science of the Total Environment, 2023, 869: 161752 Read More
  14. Yi Sun, Hongjun Li*, Xiaocheng Wang, Hongbo Li, Ye Deng. Kelp culture enhances coastal biogeochemical cycles by maintaining bacterioplankton richness and regulating bacterioplankton interactions. mSystems, 2023, 10.1128/msystems.00002-23 Read More
  15. Shiting Dai, Qing He, Ziming Han, Wenli Shen, Ye Deng, Yang Wang, Wei Qiao, Min Yang, Yu Zhang*. Uncovering the diverse hosts of tigecycline resistance gene tet(X4) in anaerobic digestion systems treating swine manure by epicPCR. Water Research X, 2023, doi.org/10.1016/j.wroa.2023.100174 Read More
  16. Shiqing Nie, Zhongwang Jing, Jichen Wang, Ye Deng, Yingshuang Zhang, Zheng Ye* & Yuan Ge*. The link between increased Desulfovibrio and disease severity in Parkinson’s disease. Applied Microbiology and Biotechnology, 2023, 107, 3033–3045 Read More
  17. Lioba Rüger, Kai Feng, Yan Chen, Ruibo Sun, Bo Sun, Ye Deng, Doris Vetterlein, Michael Bonkowski*. Responses of root architecture and the rhizosphere microbiome assembly of maize (Zea mays L.) to a soil texture gradient. Soil Biology and Biochemistry, 2023, 10.1016/j.soilbio.2023.109026 Read More
  18. Lingyue Zhu, Yan Chen*, Ruibo Sun, Jiabao Zhang*, Lauren Hale, Kenneth Dumack, Stefan Geisen, Ye Deng, Yinghua Duan, Bo Zhu, Yan Li, Wenzhao Liu, Xiaoyue Wang, Bryan S. Griffiths, Michael Bonkowski, Jizhong Zhou, Bo Sun*. Resource-dependent biodiversity and potential multi-trophic interactions determine belowground functional trait stability. Microbiome, 2023, 11: 95 Read More
  19. Chunge Li*, Ye Deng, Jingguo Wang, Weibin Ruan, Shang Wang and Weidong Kong. Effects of p-Hydroxyphenylacetic Acid and p-Hydroxybenzoic Acid on Soil Bacterial and Fungal Communities. Sustainability, 2023, 15(12), 9285 Read More
  20. Yao Guo, Songsong Gu, Kaixuan Wu, Andrew J. Tanentzap, Junqi Yu, Xiangfen Liu, Qianzheng Li, Peng He, Dongru Qiu, Ye Deng, Pei Wang, Zhenbin Wu, Qiaohong Zhou. Temperature-mediated microbial carbon utilization in China’s lakes. Global Change Biology, 2023, doi.org/10.1111/gcb.16840 Read More
  21. 🏆Yuxiang Zhao, Zishu Liu, Baofeng Zhang, Jingjie Cai, Xiangwu Yao, Meng Zhang, Ye Deng, Baolan Hu*. Inter-bacterial mutualism promoted by public goods in a system characterized by deterministic temperature variation. Nature Communications, 2023, 14:5394 Read More
  22. Li Wang, Chunang Lian, Wenjie Wan, Zhiguang Qiu, Xuesong Luo, Qiaoyun Huang, Ye Deng, Tong Zhang, Ke Yu. Salinity-triggered homogeneous selection constrains the microbial function and stability in lakes. Applied Microbiology and Biotechnology, 2023, DOI: 10.1007/s00253-023-12696-w Read More
  23. Luyao Kang, Leiyi Chen, Ziliang Li, Jianjun Wang, Kai Xue, Ye Deng, Manuel Delgado-Baquerizo, Yutong Song, Dianye Zhang, Guibiao Yang, Wei Zhou, Xuning Liu, Futing Liu, Yuanhe Yang*. Patterns and drivers of prokaryotic communities in thermokarst lake water across Northern Hemisphere. Global Ecology and Biogeography, 2023, doi.org/10.1111/geb.13764 Read More
  24. Mikhail Semenov, Hui Li, Yu Luo, Ye Deng, Yakov Kuzyakov. Editorial: Microbial regulation of soil carbon cycling in terrestrial ecosystems. Frontiers in Microbiology, 2023, doi.org/10.3389/fmicb.2023.1295624 Read More
  25. Songsong Gu, Ye Deng, Pengyuan Wang, Chenhong Li, Dejun Shi, Shuping Wang*. Assessing riverine fish community diversity and stability by eDNA metabarcoding. Ecological Indicators, 2023, 157: 111222 Read More
  26. 于皓, 刘悦, 邓晔, 芦光新, 颜珲璘, 王英成. 天然高寒草地转变为混播人工草地对土壤微生物群落特征的影响. 环境科学, 2023, 44(5):2928-2935 Read More